PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_158362g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 397aa    MW: 44444.8 Da    PI: 6.7834
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_158362g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.8e-09229275555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h+ +Er RR++i +++  L++l+P +    +k   Ka ++ + ++Y++ Lq
  MA_158362g0010 229 HSLAERVRREKISERMKLLQDLVPGC----NKITGKAVMVDEIINYVQALQ 275
                     999***********************....899****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.01E-15222293IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.17E-9222279No hitNo description
PROSITE profilePS5088815.021224274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-15225292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.7E-6229275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-8230280IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MALEGNRNYD FDGLTNYNKV SAISAPNYET SSASWHSAIS GCALNMNHQP SLQATAEGSF  60
RPDNSSYSLD ALLPFSVQVL DNVNRRTHLQ NVKLVSEHSL QRNLFSPIRV QQPEIEQKYN  120
ASGEECSSSE QSTGGRKRRI LPNDKARFQA STFTSSSEKN TENESKSKRP KIAEAKKEND  180
DSKSDAEQGT HTGRPEVNPR QSGQSVKPPE TPKDYIHVRA RRGQATDRHS LAERVRREKI  240
SERMKLLQDL VPGCNKITGK AVMVDEIINY VQALQCQVEF LSMKLEAVNP KLDFNMEGFL  300
VKDMLEPSGM SLASNTAMAY PQFHQPEWVG MQVGMPCEME EQCMGNARQV ALRRIMNENC  360
PLIEGCGDAK ISNVWDDELQ NVVRLGVGQN STSFFHI
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1184770.0BT118477.1 Picea glauca clone GQ04006_M07 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008809650.17e-74PREDICTED: transcription factor bHLH78-like isoform X2
TrEMBLD5AB870.0D5AB87_PICSI; Putative uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.36e-56cryptochrome-interacting basic-helix-loop-helix 5